dbCAN Logo

Cluster: CGMR045986_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_109005 k141_109005_8 5997 7190 + GH43_11
pfam k141_109005 k141_109005_9 7263 7655 + GH43_C2
TC k141_109005 k141_109005_10 7698 8942 + 2.A.1.2.93
pfam k141_109005 k141_109005_11 9071 11107 + DEAD | Helicase_C | ResIII | RecG_wedge | RecG_dom3_C
pfam k141_109005 k141_109005_12 11209 12270 + FA_synthesis
TC k141_109005 k141_109005_13 12315 12554 + 3.D.1.6.3
pfam k141_109005 k141_109005_14 12687 13385 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam k141_109005 k141_109005_15 13395 16952 + SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23
TC k141_109005 k141_109005_16 16967 18196 + 3.A.5.1.1
TF k141_109005 k141_109005_17 18196 18537 + HTH_11
TC k141_109005 k141_109005_18 18541 20004 + 3.A.5.2.2
Gene ID: k141_109005_8
Type: CAZyme
Location: 5997 - 7190 (+)
Gene ID: k141_109005_9
Type: pfam
Location: 7263 - 7655 (+)
Gene ID: k141_109005_10
Type: TC
Location: 7698 - 8942 (+)
Gene ID: k141_109005_11
Type: pfam
Location: 9071 - 11107 (+)
Gene ID: k141_109005_12
Type: pfam
Location: 11209 - 12270 (+)
Gene ID: k141_109005_13
Type: TC
Location: 12315 - 12554 (+)
Gene ID: k141_109005_14
Type: pfam
Location: 12687 - 13385 (+)
Gene ID: k141_109005_15
Type: pfam
Location: 13395 - 16952 (+)
Gene ID: k141_109005_16
Type: TC
Location: 16967 - 18196 (+)
Gene ID: k141_109005_17
Type: TF
Location: 18196 - 18537 (+)
Gene ID: k141_109005_18
Type: TC
Location: 18541 - 20004 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella confusa_A

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List