Cluster: CGMR045986_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045986
- CGC Family ID: CGCFAM_06684
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_54294 | k141_54294_21 | 17042 | 19261 | - | 9.B.74.1.3 |
| pfam | k141_54294 | k141_54294_22 | 19406 | 19777 | - | DUF1093 |
| TF | k141_54294 | k141_54294_23 | 19924 | 20754 | - | HTH_AraC |
| CAZyme | k141_54294 | k141_54294_24 | 20863 | 21924 | - | GH31_3 |
| pfam | k141_54294 | k141_54294_25 | 21931 | 22980 | - | Glyco_hydro_31_2nd | Gal_mutarotas_2 |
| TC | k141_54294 | k141_54294_26 | 23023 | 23559 | - | 2.A.2.3.3 |
| TC | k141_54294 | k141_54294_27 | 23528 | 24442 | - | 2.A.2.3.3 |
| CAZyme | k141_54294 | k141_54294_28 | 24688 | 25854 | - | GH8 |
| STP | k141_54294 | k141_54294_29 | 25999 | 27246 | - | HATPase_c | HisKA |
| TF | k141_54294 | k141_54294_30 | 27251 | 27949 | - | Trans_reg_C |
| TC | k141_54294 | k141_54294_31 | 28167 | 29120 | - | 2.A.109.1.2 |
| pfam | k141_54294 | k141_54294_32 | 29473 | 31734 | - | MucBP |
| TC | k141_54294 | k141_54294_33 | 31870 | 33321 | - | 4.C.1.1.6 |
Gene ID: k141_54294_21
Type: TC
Location: 17042 - 19261 (-)
Type: TC
Location: 17042 - 19261 (-)
Gene ID: k141_54294_22
Type: pfam
Location: 19406 - 19777 (-)
Type: pfam
Location: 19406 - 19777 (-)
Gene ID: k141_54294_23
Type: TF
Location: 19924 - 20754 (-)
Type: TF
Location: 19924 - 20754 (-)
Gene ID: k141_54294_24
Type: CAZyme
Location: 20863 - 21924 (-)
Type: CAZyme
Location: 20863 - 21924 (-)
Gene ID: k141_54294_25
Type: pfam
Location: 21931 - 22980 (-)
Type: pfam
Location: 21931 - 22980 (-)
Gene ID: k141_54294_26
Type: TC
Location: 23023 - 23559 (-)
Type: TC
Location: 23023 - 23559 (-)
Gene ID: k141_54294_27
Type: TC
Location: 23528 - 24442 (-)
Type: TC
Location: 23528 - 24442 (-)
Gene ID: k141_54294_28
Type: CAZyme
Location: 24688 - 25854 (-)
Type: CAZyme
Location: 24688 - 25854 (-)
Gene ID: k141_54294_29
Type: STP
Location: 25999 - 27246 (-)
Type: STP
Location: 25999 - 27246 (-)
Gene ID: k141_54294_30
Type: TF
Location: 27251 - 27949 (-)
Type: TF
Location: 27251 - 27949 (-)
Gene ID: k141_54294_31
Type: TC
Location: 28167 - 29120 (-)
Type: TC
Location: 28167 - 29120 (-)
Gene ID: k141_54294_32
Type: pfam
Location: 29473 - 31734 (-)
Type: pfam
Location: 29473 - 31734 (-)
Gene ID: k141_54294_33
Type: TC
Location: 31870 - 33321 (-)
Type: TC
Location: 31870 - 33321 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.