Cluster: CGMR045986_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045986
- CGC Family ID: CGCFAM_06690
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_201803 | k141_201803_59 | 68173 | 68793 | - | 2.A.87.2.1 |
| pfam | k141_201803 | k141_201803_60 | 68969 | 69640 | - | Hydrolase | HAD_2 |
| CAZyme | k141_201803 | k141_201803_61 | 69642 | 71903 | - | GH65 |
| CAZyme | k141_201803 | k141_201803_62 | 71922 | 73688 | - | CBM34 | GH13_20 |
| TC | k141_201803 | k141_201803_63 | 73709 | 75067 | - | 2.A.2.6.2 |
| TF | k141_201803 | k141_201803_64 | 75283 | 76212 | + | LacI |
| TC | k141_201803 | k141_201803_65 | 76256 | 77452 | - | 3.A.1.122.3 |
| TC | k141_201803 | k141_201803_66 | 77452 | 78123 | - | 3.A.1.122.3 |
Gene ID: k141_201803_59
Type: TC
Location: 68173 - 68793 (-)
Type: TC
Location: 68173 - 68793 (-)
Gene ID: k141_201803_60
Type: pfam
Location: 68969 - 69640 (-)
Type: pfam
Location: 68969 - 69640 (-)
Gene ID: k141_201803_61
Type: CAZyme
Location: 69642 - 71903 (-)
Type: CAZyme
Location: 69642 - 71903 (-)
Gene ID: k141_201803_62
Type: CAZyme
Location: 71922 - 73688 (-)
Type: CAZyme
Location: 71922 - 73688 (-)
Gene ID: k141_201803_63
Type: TC
Location: 73709 - 75067 (-)
Type: TC
Location: 73709 - 75067 (-)
Gene ID: k141_201803_64
Type: TF
Location: 75283 - 76212 (+)
Type: TF
Location: 75283 - 76212 (+)
Gene ID: k141_201803_65
Type: TC
Location: 76256 - 77452 (-)
Type: TC
Location: 76256 - 77452 (-)
Gene ID: k141_201803_66
Type: TC
Location: 77452 - 78123 (-)
Type: TC
Location: 77452 - 78123 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.