Cluster: CGMR045823_CGC60
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045823
- CGC Family ID: CGCFAM_00522
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18429 | k141_18429_23 | 24636 | 25958 | + | 2.A.40.1.3 |
| pfam | k141_18429 | k141_18429_24 | 26032 | 26553 | - | Acetyltransf_1 |
| pfam | k141_18429 | k141_18429_25 | 26560 | 26829 | - | TacA1 |
| TC | k141_18429 | k141_18429_26 | 26891 | 27808 | - | 2.A.7.3.52 |
| pfam | k141_18429 | k141_18429_27 | 27925 | 28098 | - | KGG | KGG |
| CAZyme | k141_18429 | k141_18429_28 | 28490 | 29086 | + | AA6 |
Gene ID: k141_18429_23
Type: TC
Location: 24636 - 25958 (+)
Type: TC
Location: 24636 - 25958 (+)
Gene ID: k141_18429_24
Type: pfam
Location: 26032 - 26553 (-)
Type: pfam
Location: 26032 - 26553 (-)
Gene ID: k141_18429_25
Type: pfam
Location: 26560 - 26829 (-)
Type: pfam
Location: 26560 - 26829 (-)
Gene ID: k141_18429_26
Type: TC
Location: 26891 - 27808 (-)
Type: TC
Location: 26891 - 27808 (-)
Gene ID: k141_18429_27
Type: pfam
Location: 27925 - 28098 (-)
Type: pfam
Location: 27925 - 28098 (-)
Gene ID: k141_18429_28
Type: CAZyme
Location: 28490 - 29086 (+)
Type: CAZyme
Location: 28490 - 29086 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter pseudoroggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_18429_26 | vegetarian > omnivore | 1.61651 | 0.02866 |
| k141_18429_26 | vegetarian > vegan | 2.25669 | 0.01829 |
| k141_18429_27 | vegetarian > vegan | 2.55692 | 0.02695 |