Cluster: CGMR045823_CGC52
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045823
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_41615 | k141_41615_92 | 88259 | 89848 | + | 3.A.1.5.20 |
| TC | k141_41615 | k141_41615_93 | 89894 | 90847 | + | 3.A.1.5.20 |
| TC | k141_41615 | k141_41615_94 | 90853 | 91698 | + | 3.A.1.5.20 |
| TC | k141_41615 | k141_41615_95 | 91691 | 92668 | + | 3.A.1.5.2 |
| TC | k141_41615 | k141_41615_96 | 92665 | 93642 | + | 3.A.1.5.20 |
| peptidase | k141_41615 | k141_41615_97 | 93754 | 95616 | + | C51.A01 |
| pfam | k141_41615 | k141_41615_98 | 95669 | 96100 | - | PgaD |
| CAZyme | k141_41615 | k141_41615_99 | 96097 | 97428 | - | GT2 |
| CAZyme | k141_41615 | k141_41615_100 | 97421 | 99358 | - | CE4 | GH153 | GH153 |
| TC | k141_41615 | k141_41615_101 | 99367 | 101805 | - | 1.B.55.1.1 |
Gene ID: k141_41615_92
Type: TC
Location: 88259 - 89848 (+)
Type: TC
Location: 88259 - 89848 (+)
Gene ID: k141_41615_93
Type: TC
Location: 89894 - 90847 (+)
Type: TC
Location: 89894 - 90847 (+)
Gene ID: k141_41615_94
Type: TC
Location: 90853 - 91698 (+)
Type: TC
Location: 90853 - 91698 (+)
Gene ID: k141_41615_95
Type: TC
Location: 91691 - 92668 (+)
Type: TC
Location: 91691 - 92668 (+)
Gene ID: k141_41615_96
Type: TC
Location: 92665 - 93642 (+)
Type: TC
Location: 92665 - 93642 (+)
Gene ID: k141_41615_97
Type: peptidase
Location: 93754 - 95616 (+)
Type: peptidase
Location: 93754 - 95616 (+)
Gene ID: k141_41615_98
Type: pfam
Location: 95669 - 96100 (-)
Type: pfam
Location: 95669 - 96100 (-)
Gene ID: k141_41615_99
Type: CAZyme
Location: 96097 - 97428 (-)
Type: CAZyme
Location: 96097 - 97428 (-)
Gene ID: k141_41615_100
Type: CAZyme
Location: 97421 - 99358 (-)
Type: CAZyme
Location: 97421 - 99358 (-)
Gene ID: k141_41615_101
Type: TC
Location: 99367 - 101805 (-)
Type: TC
Location: 99367 - 101805 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter pseudoroggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_41615_98 | vegetarian > omnivore | 2.26659 | 0.02866 |
| k141_41615_98 | vegetarian > vegan | 1.32970 | 0.03571 |
| k141_41615_99 | vegetarian > omnivore | 2.05147 | 0.02866 |
| k141_41615_99 | vegetarian > vegan | 1.55091 | 0.03571 |
| k141_41615_100 | vegetarian > omnivore | 1.50893 | 0.02866 |
| k141_41615_100 | vegetarian > vegan | 1.20358 | 0.03571 |
| k141_41615_101 | vegetarian > omnivore | 1.67003 | 0.02866 |