Cluster: CGMR045823_CGC50
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045823
- CGC Family ID: CGCFAM_00796
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_19577 | k141_19577_113 | 129941 | 130255 | + | 4.A.3.2.6 |
| TC | k141_19577 | k141_19577_114 | 130267 | 131595 | + | 4.A.3.2.6 |
| CAZyme | k141_19577 | k141_19577_115 | 131613 | 132989 | + | GH1 |
| TC | k141_19577 | k141_19577_116 | 132992 | 133297 | + | 4.A.3.2.1 |
| pfam | k141_19577 | k141_19577_117 | 133436 | 134815 | + | LamB |
| TC | k141_19577 | k141_19577_118 | 134950 | 135855 | + | 2.A.7.3.12 |
| TC | k141_19577 | k141_19577_119 | 135904 | 137094 | - | 2.A.1.2.26 |
| pfam | k141_19577 | k141_19577_120 | 137197 | 137649 | - | DUF1198 |
| pfam | k141_19577 | k141_19577_121 | 137847 | 138647 | + | Lactamase_B | Lactamase_B_2 |
| TC | k141_19577 | k141_19577_122 | 138711 | 140102 | - | 2.A.1.4.1 |
| TC | k141_19577 | k141_19577_123 | 140235 | 141545 | - | 2.A.1.4.4 |
Gene ID: k141_19577_113
Type: TC
Location: 129941 - 130255 (+)
Type: TC
Location: 129941 - 130255 (+)
Gene ID: k141_19577_114
Type: TC
Location: 130267 - 131595 (+)
Type: TC
Location: 130267 - 131595 (+)
Gene ID: k141_19577_115
Type: CAZyme
Location: 131613 - 132989 (+)
Type: CAZyme
Location: 131613 - 132989 (+)
Gene ID: k141_19577_116
Type: TC
Location: 132992 - 133297 (+)
Type: TC
Location: 132992 - 133297 (+)
Gene ID: k141_19577_117
Type: pfam
Location: 133436 - 134815 (+)
Type: pfam
Location: 133436 - 134815 (+)
Gene ID: k141_19577_118
Type: TC
Location: 134950 - 135855 (+)
Type: TC
Location: 134950 - 135855 (+)
Gene ID: k141_19577_119
Type: TC
Location: 135904 - 137094 (-)
Type: TC
Location: 135904 - 137094 (-)
Gene ID: k141_19577_120
Type: pfam
Location: 137197 - 137649 (-)
Type: pfam
Location: 137197 - 137649 (-)
Gene ID: k141_19577_121
Type: pfam
Location: 137847 - 138647 (+)
Type: pfam
Location: 137847 - 138647 (+)
Gene ID: k141_19577_122
Type: TC
Location: 138711 - 140102 (-)
Type: TC
Location: 138711 - 140102 (-)
Gene ID: k141_19577_123
Type: TC
Location: 140235 - 141545 (-)
Type: TC
Location: 140235 - 141545 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Enterobacter
Species
Enterobacter pseudoroggenkampii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_19577_113 | vegetarian > omnivore | 1.84303 | 0.02866 |
| k141_19577_113 | vegetarian > vegan | 1.15349 | 0.03571 |
| k141_19577_114 | vegetarian > omnivore | 1.53193 | 0.02866 |
| k141_19577_114 | vegetarian > vegan | 1.19132 | 0.03571 |
| k141_19577_115 | vegetarian > omnivore | 1.20592 | 0.02866 |
| k141_19577_115 | vegetarian > vegan | 1.17896 | 0.03571 |
| k141_19577_116 | vegetarian > omnivore | 2.25522 | 0.01986 |
| k141_19577_117 | vegetarian > omnivore | 1.32795 | 0.02866 |
| k141_19577_117 | vegetarian > vegan | 1.66406 | 0.03571 |
| k141_19577_118 | vegetarian > omnivore | 1.12792 | 0.02866 |