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Cluster: CGMR045823_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19577 k141_19577_9 8761 9753 + 3.A.1.2.4
TC k141_19577 k141_19577_10 9826 11367 + 3.A.1.2.4
TC k141_19577 k141_19577_11 11345 12526 + 3.A.1.2.4
TF k141_19577 k141_19577_12 12560 13738 + HTH_AraC | HTH_AraC
CAZyme k141_19577 k141_19577_13 13778 14350 - GH73
CAZyme k141_19577 k141_19577_14 14917 16947 + GH13_19
STP k141_19577 k141_19577_15 17144 18397 + Aminotran_1_2
TC k141_19577 k141_19577_16 18405 18860 - 3.D.1.9.2
Gene ID: k141_19577_9
Type: TC
Location: 8761 - 9753 (+)
Gene ID: k141_19577_10
Type: TC
Location: 9826 - 11367 (+)
Gene ID: k141_19577_11
Type: TC
Location: 11345 - 12526 (+)
Gene ID: k141_19577_12
Type: TF
Location: 12560 - 13738 (+)
Gene ID: k141_19577_13
Type: CAZyme
Location: 13778 - 14350 (-)
Gene ID: k141_19577_14
Type: CAZyme
Location: 14917 - 16947 (+)
Gene ID: k141_19577_15
Type: STP
Location: 17144 - 18397 (+)
Gene ID: k141_19577_16
Type: TC
Location: 18405 - 18860 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_19577_10 vegetarian > omnivore 1.48984 0.02866
k141_19577_10 vegetarian > vegan 1.13701 0.03571
k141_19577_14 vegetarian > omnivore 1.52268 0.02866
k141_19577_16 vegetarian > omnivore 1.34304 0.02934
k141_19577_16 vegetarian > vegan 3.01139 0.03571

🧭 Explore Read Mapping of CGC

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