dbCAN HGM

Cluster: CGMR045823_CGC39

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	k141_16434	k141_16434_14	15503	17188	-	9.B.33.1.1
TF	k141_16434	k141_16434_15	17406	18146	+	MerR
NULL(UNKNOWN)	k141_16434	k141_16434_16	18216	18329	+	NULL(UNKNOWN) [View Structural Homologs]
TC	k141_16434	k141_16434_17	18304	19041	-	3.A.1.12.15
TC	k141_16434	k141_16434_18	19025	19975	-	3.A.1.12.15
TC	k141_16434	k141_16434_19	19968	21125	-	3.A.1.12.15
TC	k141_16434	k141_16434_20	21138	22055	-	3.A.1.12.15
CAZyme	k141_16434	k141_16434_21	22204	24501	-	GH3

Gene ID: k141_16434_14
Type: TC
Location: 15503 - 17188 (-)

Gene ID: k141_16434_15
Type: TF
Location: 17406 - 18146 (+)

Gene ID: k141_16434_16
Type:
Location: 18216 - 18329 (+)

Gene ID: k141_16434_17
Type: TC
Location: 18304 - 19041 (-)

Gene ID: k141_16434_18
Type: TC
Location: 19025 - 19975 (-)

Gene ID: k141_16434_19
Type: TC
Location: 19968 - 21125 (-)

Gene ID: k141_16434_20
Type: TC
Location: 21138 - 22055 (-)

Gene ID: k141_16434_21
Type: CAZyme
Location: 22204 - 24501 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
k141_16434_15	vegetarian > omnivore	1.70298	0.02866
k141_16434_15	vegetarian > vegan	1.64053	0.03571
k141_16434_16	vegetarian > omnivore	2.79125	0.02866
k141_16434_16	vegetarian > vegan	1.62734	0.03571