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Cluster: CGMR045823_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54327 k141_54327_16 13050 13343 - 3.A.1.27.3
TC k141_54327 k141_54327_17 13343 13978 - 3.A.1.27.3
TC k141_54327 k141_54327_18 13997 14545 - 3.A.1.27.3
TC k141_54327 k141_54327_19 14550 15332 - 3.A.1.27.3
TC k141_54327 k141_54327_20 15340 16152 - 3.A.1.27.3
TC k141_54327 k141_54327_21 16380 17357 + 2.A.19.5.1
STP k141_54327 k141_54327_22 17370 18356 + CBS | CBS | SIS
pfam k141_54327 k141_54327_23 18371 18937 + Hydrolase_3
TC k141_54327 k141_54327_24 18934 19509 + 1.B.42.1.2
TC k141_54327 k141_54327_25 19478 20032 + 1.B.42.1.2
TC k141_54327 k141_54327_26 20039 20764 + 1.B.42.1.2
pfam k141_54327 k141_54327_27 20812 22245 + Sigma54_AID | Sigma54_DBD | Sigma54_CBD
pfam k141_54327 k141_54327_28 22268 22555 + Ribosomal_S30AE
TC k141_54327 k141_54327_29 22638 23129 + 4.A.2.1.4
pfam k141_54327 k141_54327_30 23175 24029 + RapZ-like_N | PapZ_C
TC k141_54327 k141_54327_31 24026 24298 + 8.A.8.1.5
CAZyme k141_54327 k141_54327_32 24338 25063 - GT51
peptidase k141_54327 k141_54327_33 25060 25716 - C56.975
STP k141_54327 k141_54327_34 25946 28279 - HATPase_c | HisKA | PAS | Response_reg
TC k141_54327 k141_54327_35 28415 29497 - 1.B.42.1.2
TC k141_54327 k141_54327_36 29497 30576 - 1.B.42.1.2
Gene ID: k141_54327_16
Type: TC
Location: 13050 - 13343 (-)
Gene ID: k141_54327_17
Type: TC
Location: 13343 - 13978 (-)
Gene ID: k141_54327_18
Type: TC
Location: 13997 - 14545 (-)
Gene ID: k141_54327_19
Type: TC
Location: 14550 - 15332 (-)
Gene ID: k141_54327_20
Type: TC
Location: 15340 - 16152 (-)
Gene ID: k141_54327_21
Type: TC
Location: 16380 - 17357 (+)
Gene ID: k141_54327_22
Type: STP
Location: 17370 - 18356 (+)
Gene ID: k141_54327_23
Type: pfam
Location: 18371 - 18937 (+)
Gene ID: k141_54327_24
Type: TC
Location: 18934 - 19509 (+)
Gene ID: k141_54327_25
Type: TC
Location: 19478 - 20032 (+)
Gene ID: k141_54327_26
Type: TC
Location: 20039 - 20764 (+)
Gene ID: k141_54327_27
Type: pfam
Location: 20812 - 22245 (+)
Gene ID: k141_54327_28
Type: pfam
Location: 22268 - 22555 (+)
Gene ID: k141_54327_29
Type: TC
Location: 22638 - 23129 (+)
Gene ID: k141_54327_30
Type: pfam
Location: 23175 - 24029 (+)
Gene ID: k141_54327_31
Type: TC
Location: 24026 - 24298 (+)
Gene ID: k141_54327_32
Type: CAZyme
Location: 24338 - 25063 (-)
Gene ID: k141_54327_33
Type: peptidase
Location: 25060 - 25716 (-)
Gene ID: k141_54327_34
Type: STP
Location: 25946 - 28279 (-)
Gene ID: k141_54327_35
Type: TC
Location: 28415 - 29497 (-)
Gene ID: k141_54327_36
Type: TC
Location: 29497 - 30576 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_54327_22 vegetarian > vegan 1.05010 0.03571

🧭 Explore Read Mapping of CGC

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