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Cluster: CGMR045823_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65275 k141_65275_1 2 994 - 2.A.6.2.12
TC k141_65275 k141_65275_2 995 4117 - 2.A.6.2.12
TC k141_65275 k141_65275_3 4117 5160 - 8.A.1.6.2
pfam k141_65275 k141_65275_4 5532 6884 - HSP70 | HSP70 | MreB_Mbl
STP k141_65275 k141_65275_5 7015 7887 + AlkA_N | HhH-GPD
TC k141_65275 k141_65275_6 7852 11181 - 9.B.34.1.1
pfam k141_65275 k141_65275_7 11525 12166 + PRK
pfam k141_65275 k141_65275_8 12258 12839 + DCD_N | DCD
TC k141_65275 k141_65275_9 12862 14712 + 9.B.22.2.1
TC k141_65275 k141_65275_10 14803 16386 - 2.A.109.2.3
TC k141_65275 k141_65275_11 17079 18218 + 1.B.18.3.1
pfam k141_65275 k141_65275_12 18225 18668 + LMWPc
TC k141_65275 k141_65275_13 18671 20833 + 8.A.3.3.2
CAZyme k141_65275 k141_65275_14 20985 21827 + GT2
pfam k141_65275 k141_65275_15 21827 22318 + Hexapep
CAZyme k141_65275 k141_65275_16 22315 23532 + GT4
NULL(UNKNOWN) k141_65275 k141_65275_17 23507 24727 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_65275 k141_65275_18 24744 25490 + GT2
Gene ID: k141_65275_1
Type: TC
Location: 2 - 994 (-)
Gene ID: k141_65275_2
Type: TC
Location: 995 - 4117 (-)
Gene ID: k141_65275_3
Type: TC
Location: 4117 - 5160 (-)
Gene ID: k141_65275_4
Type: pfam
Location: 5532 - 6884 (-)
Gene ID: k141_65275_5
Type: STP
Location: 7015 - 7887 (+)
Gene ID: k141_65275_6
Type: TC
Location: 7852 - 11181 (-)
Gene ID: k141_65275_7
Type: pfam
Location: 11525 - 12166 (+)
Gene ID: k141_65275_8
Type: pfam
Location: 12258 - 12839 (+)
Gene ID: k141_65275_9
Type: TC
Location: 12862 - 14712 (+)
Gene ID: k141_65275_10
Type: TC
Location: 14803 - 16386 (-)
Gene ID: k141_65275_11
Type: TC
Location: 17079 - 18218 (+)
Gene ID: k141_65275_12
Type: pfam
Location: 18225 - 18668 (+)
Gene ID: k141_65275_13
Type: TC
Location: 18671 - 20833 (+)
Gene ID: k141_65275_14
Type: CAZyme
Location: 20985 - 21827 (+)
Gene ID: k141_65275_15
Type: pfam
Location: 21827 - 22318 (+)
Gene ID: k141_65275_16
Type: CAZyme
Location: 22315 - 23532 (+)
Gene ID: k141_65275_17
Type:
Location: 23507 - 24727 (+)
Gene ID: k141_65275_18
Type: CAZyme
Location: 24744 - 25490 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_65275_5 vegetarian > omnivore 1.85502 0.02866
k141_65275_6 vegetarian > omnivore 1.23234 0.02866
k141_65275_18 vegetarian > omnivore 1.04270 0.04385

🧭 Explore Read Mapping of CGC

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