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Cluster: CGMR045823_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_40176 k141_40176_10 8095 9585 + 4.A.1.1.2
STP k141_40176 k141_40176_11 9718 11385 + SBP_bac_5
TC k141_40176 k141_40176_12 11358 12380 - 2.A.52.1.1
pfam k141_40176 k141_40176_13 12358 14598 - Acylphosphatase | Sua5_yciO_yrdC | zf-HYPF | zf-HYPF | HypF_C | HypF_C_2
TC k141_40176 k141_40176_14 14604 15149 - 5.A.3.11.1
TF k141_40176 k141_40176_15 15284 16297 - LacI
TC k141_40176 k141_40176_16 16512 17963 + 4.A.1.2.3
CAZyme k141_40176 k141_40176_17 17982 19406 + GH1
peptidase k141_40176 k141_40176_18 19501 19956 - A31.003
pfam k141_40176 k141_40176_19 19949 20359 - HycH
TC k141_40176 k141_40176_20 20356 21123 - 3.D.1.9.2
TC k141_40176 k141_40176_21 21123 21665 - 3.D.1.9.2
TC k141_40176 k141_40176_22 21675 23384 - 3.D.1.9.2
TC k141_40176 k141_40176_23 23400 24323 - 3.D.1.9.2
TC k141_40176 k141_40176_24 24325 26139 - 3.D.1.9.2
TC k141_40176 k141_40176_25 26136 26744 - 3.D.1.9.2
Gene ID: k141_40176_10
Type: TC
Location: 8095 - 9585 (+)
Gene ID: k141_40176_11
Type: STP
Location: 9718 - 11385 (+)
Gene ID: k141_40176_12
Type: TC
Location: 11358 - 12380 (-)
Gene ID: k141_40176_13
Type: pfam
Location: 12358 - 14598 (-)
Gene ID: k141_40176_14
Type: TC
Location: 14604 - 15149 (-)
Gene ID: k141_40176_15
Type: TF
Location: 15284 - 16297 (-)
Gene ID: k141_40176_16
Type: TC
Location: 16512 - 17963 (+)
Gene ID: k141_40176_17
Type: CAZyme
Location: 17982 - 19406 (+)
Gene ID: k141_40176_18
Type: peptidase
Location: 19501 - 19956 (-)
Gene ID: k141_40176_19
Type: pfam
Location: 19949 - 20359 (-)
Gene ID: k141_40176_20
Type: TC
Location: 20356 - 21123 (-)
Gene ID: k141_40176_21
Type: TC
Location: 21123 - 21665 (-)
Gene ID: k141_40176_22
Type: TC
Location: 21675 - 23384 (-)
Gene ID: k141_40176_23
Type: TC
Location: 23400 - 24323 (-)
Gene ID: k141_40176_24
Type: TC
Location: 24325 - 26139 (-)
Gene ID: k141_40176_25
Type: TC
Location: 26136 - 26744 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40176_12 vegetarian > omnivore 1.16536 0.02866
k141_40176_15 vegetarian > omnivore 1.21988 0.02934

🧭 Explore Read Mapping of CGC

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