Cluster: CGMR045820_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045820
- CGC Family ID: CGCFAM_04300
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_477443 | k141_477443_37 | 43142 | 43579 | - | 3.D.1.8.1 |
| pfam | k141_477443 | k141_477443_38 | 43766 | 44707 | + | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd |
| NULL(UNKNOWN) | k141_477443 | k141_477443_39 | 45204 | 45350 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_477443 | k141_477443_40 | 45340 | 47154 | + | GH2 |
| CAZyme | k141_477443 | k141_477443_41 | 47237 | 49087 | + | GH2 |
Gene ID: k141_477443_37
Type: TC
Location: 43142 - 43579 (-)
Type: TC
Location: 43142 - 43579 (-)
Gene ID: k141_477443_38
Type: pfam
Location: 43766 - 44707 (+)
Type: pfam
Location: 43766 - 44707 (+)
Gene ID: k141_477443_39
Type:
Location: 45204 - 45350 (+)
Type:
Location: 45204 - 45350 (+)
Gene ID: k141_477443_40
Type: CAZyme
Location: 45340 - 47154 (+)
Type: CAZyme
Location: 45340 - 47154 (+)
Gene ID: k141_477443_41
Type: CAZyme
Location: 47237 - 49087 (+)
Type: CAZyme
Location: 47237 - 49087 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017391185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.