Cluster: CGMR045820_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045820
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_477443 | k141_477443_24 | 25128 | 25754 | + | 2.A.124.1.4 |
| CAZyme | k141_477443 | k141_477443_25 | 25779 | 27458 | + | GH110 |
| STP | k141_477443 | k141_477443_26 | 27496 | 30999 | - | B12-binding | B12-binding_2 |
| pfam | k141_477443 | k141_477443_27 | 31010 | 31966 | - | MTHFR |
| TC | k141_477443 | k141_477443_28 | 32094 | 33089 | + | 9.A.23.1.1 |
| CAZyme | k141_477443 | k141_477443_29 | 33438 | 35210 | + | GH78 |
| TC | k141_477443 | k141_477443_30 | 35270 | 36388 | - | 2.A.1.46.5 |
Gene ID: k141_477443_24
Type: TC
Location: 25128 - 25754 (+)
Type: TC
Location: 25128 - 25754 (+)
Gene ID: k141_477443_25
Type: CAZyme
Location: 25779 - 27458 (+)
Type: CAZyme
Location: 25779 - 27458 (+)
Gene ID: k141_477443_26
Type: STP
Location: 27496 - 30999 (-)
Type: STP
Location: 27496 - 30999 (-)
Gene ID: k141_477443_27
Type: pfam
Location: 31010 - 31966 (-)
Type: pfam
Location: 31010 - 31966 (-)
Gene ID: k141_477443_28
Type: TC
Location: 32094 - 33089 (+)
Type: TC
Location: 32094 - 33089 (+)
Gene ID: k141_477443_29
Type: CAZyme
Location: 33438 - 35210 (+)
Type: CAZyme
Location: 33438 - 35210 (+)
Gene ID: k141_477443_30
Type: TC
Location: 35270 - 36388 (-)
Type: TC
Location: 35270 - 36388 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017391185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.