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Cluster: CGMR045820_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_218899 k141_218899_39 43086 43892 - GH16_3
CAZyme k141_218899 k141_218899_40 43907 44728 - GH16_3
NULL(UNKNOWN) k141_218899 k141_218899_41 45007 45612 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_218899 k141_218899_42 45624 46463 + DUF2764
TC k141_218899 k141_218899_43 46479 48236 + 3.A.2.3.3
TC k141_218899 k141_218899_44 48245 49564 + 3.A.2.3.3
pfam k141_218899 k141_218899_45 49573 50181 + ATP-synt_D
TC k141_218899 k141_218899_46 50178 52043 + 3.A.2.3.3
pfam k141_218899 k141_218899_47 52082 52540 + ATP-synt_C | ATP-synt_C
TC k141_218899 k141_218899_48 53022 54287 + 2.A.1.10.1
Gene ID: k141_218899_39
Type: CAZyme
Location: 43086 - 43892 (-)
Gene ID: k141_218899_40
Type: CAZyme
Location: 43907 - 44728 (-)
Gene ID: k141_218899_41
Type:
Location: 45007 - 45612 (+)
Gene ID: k141_218899_42
Type: pfam
Location: 45624 - 46463 (+)
Gene ID: k141_218899_43
Type: TC
Location: 46479 - 48236 (+)
Gene ID: k141_218899_44
Type: TC
Location: 48245 - 49564 (+)
Gene ID: k141_218899_45
Type: pfam
Location: 49573 - 50181 (+)
Gene ID: k141_218899_46
Type: TC
Location: 50178 - 52043 (+)
Gene ID: k141_218899_47
Type: pfam
Location: 52082 - 52540 (+)
Gene ID: k141_218899_48
Type: TC
Location: 53022 - 54287 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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