Cluster: CGMR045820_CGC11
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR045820
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_666330 | k141_666330_6 | 7029 | 10121 | - | 1.B.14.6.1 |
| pfam | k141_666330 | k141_666330_7 | 10584 | 12584 | - | CotH |
| CAZyme | k141_666330 | k141_666330_8 | 12974 | 15076 | - | GH36 |
| pfam | k141_666330 | k141_666330_9 | 15125 | 16225 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_8 | DUF4369 |
| peptidase | k141_666330 | k141_666330_10 | 16420 | 17427 | - | S09.UPW |
| TC | k141_666330 | k141_666330_11 | 17576 | 19894 | - | 1.B.14.1.4 |
| NULL(UNKNOWN) | k141_666330 | k141_666330_12 | 19990 | 20349 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_666330 | k141_666330_13 | 20608 | 21180 | - | EFP | EFP_N | Elong-fact-P_C |
| CAZyme | k141_666330 | k141_666330_14 | 21287 | 23143 | - | GH20 |
| pfam | k141_666330 | k141_666330_15 | 23183 | 23731 | - | Flavoprotein |
| CAZyme | k141_666330 | k141_666330_16 | 23735 | 24343 | - | CE4 |
Gene ID: k141_666330_6
Type: TC
Location: 7029 - 10121 (-)
Type: TC
Location: 7029 - 10121 (-)
Gene ID: k141_666330_7
Type: pfam
Location: 10584 - 12584 (-)
Type: pfam
Location: 10584 - 12584 (-)
Gene ID: k141_666330_8
Type: CAZyme
Location: 12974 - 15076 (-)
Type: CAZyme
Location: 12974 - 15076 (-)
Gene ID: k141_666330_9
Type: pfam
Location: 15125 - 16225 (-)
Type: pfam
Location: 15125 - 16225 (-)
Gene ID: k141_666330_10
Type: peptidase
Location: 16420 - 17427 (-)
Type: peptidase
Location: 16420 - 17427 (-)
Gene ID: k141_666330_11
Type: TC
Location: 17576 - 19894 (-)
Type: TC
Location: 17576 - 19894 (-)
Gene ID: k141_666330_12
Type:
Location: 19990 - 20349 (-)
Type:
Location: 19990 - 20349 (-)
Gene ID: k141_666330_13
Type: pfam
Location: 20608 - 21180 (-)
Type: pfam
Location: 20608 - 21180 (-)
Gene ID: k141_666330_14
Type: CAZyme
Location: 21287 - 23143 (-)
Type: CAZyme
Location: 21287 - 23143 (-)
Gene ID: k141_666330_15
Type: pfam
Location: 23183 - 23731 (-)
Type: pfam
Location: 23183 - 23731 (-)
Gene ID: k141_666330_16
Type: CAZyme
Location: 23735 - 24343 (-)
Type: CAZyme
Location: 23735 - 24343 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp017391185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.