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Cluster: CGMR045820_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_108917 k141_108917_33 34440 36173 + GH123
CAZyme k141_108917 k141_108917_34 36379 38829 + GH95
TC k141_108917 k141_108917_35 38841 40310 + 2.A.1.4.6
pfam k141_108917 k141_108917_36 40343 41488 + DUF5009
CAZyme k141_108917 k141_108917_37 41518 43632 + GH59
pfam k141_108917 k141_108917_38 43795 44604 - DUF4465
TC k141_108917 k141_108917_39 45240 46163 + 3.A.1.128.7
pfam k141_108917 k141_108917_40 46177 47493 + ABC2_membrane_3
TC k141_108917 k141_108917_41 48017 49291 - 2.A.1.7.11
Gene ID: k141_108917_33
Type: CAZyme
Location: 34440 - 36173 (+)
Gene ID: k141_108917_34
Type: CAZyme
Location: 36379 - 38829 (+)
Gene ID: k141_108917_35
Type: TC
Location: 38841 - 40310 (+)
Gene ID: k141_108917_36
Type: pfam
Location: 40343 - 41488 (+)
Gene ID: k141_108917_37
Type: CAZyme
Location: 41518 - 43632 (+)
Gene ID: k141_108917_38
Type: pfam
Location: 43795 - 44604 (-)
Gene ID: k141_108917_39
Type: TC
Location: 45240 - 46163 (+)
Gene ID: k141_108917_40
Type: pfam
Location: 46177 - 47493 (+)
Gene ID: k141_108917_41
Type: TC
Location: 48017 - 49291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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