Cluster: CGMR045759_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045759
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_188944 | k141_188944_2 | 493 | 3237 | - | 3.A.5.1.1 |
| STP | k141_188944 | k141_188944_3 | 3410 | 4330 | - | Peptidase_M23 |
| pfam | k141_188944 | k141_188944_4 | 4338 | 4787 | + | DciA |
| CAZyme | k141_188944 | k141_188944_5 | 5076 | 5987 | - | CE11 |
Gene ID: k141_188944_2
Type: TC
Location: 493 - 3237 (-)
Type: TC
Location: 493 - 3237 (-)
Gene ID: k141_188944_3
Type: STP
Location: 3410 - 4330 (-)
Type: STP
Location: 3410 - 4330 (-)
Gene ID: k141_188944_4
Type: pfam
Location: 4338 - 4787 (+)
Type: pfam
Location: 4338 - 4787 (+)
Gene ID: k141_188944_5
Type: CAZyme
Location: 5076 - 5987 (-)
Type: CAZyme
Location: 5076 - 5987 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.