Cluster: CGMR045759_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045759
- CGC Family ID: CGCFAM_00156
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1550644 | k141_1550644_18 | 16061 | 17725 | + | 3.A.1.120.6 |
| pfam | k141_1550644 | k141_1550644_19 | 17749 | 18576 | + | OMPdecase |
| CAZyme | k141_1550644 | k141_1550644_20 | 18709 | 19677 | - | GT2 |
| CAZyme | k141_1550644 | k141_1550644_21 | 19674 | 20465 | - | GT2 |
Gene ID: k141_1550644_18
Type: TC
Location: 16061 - 17725 (+)
Type: TC
Location: 16061 - 17725 (+)
Gene ID: k141_1550644_19
Type: pfam
Location: 17749 - 18576 (+)
Type: pfam
Location: 17749 - 18576 (+)
Gene ID: k141_1550644_20
Type: CAZyme
Location: 18709 - 19677 (-)
Type: CAZyme
Location: 18709 - 19677 (-)
Gene ID: k141_1550644_21
Type: CAZyme
Location: 19674 - 20465 (-)
Type: CAZyme
Location: 19674 - 20465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.