Cluster: CGMR045759_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045759
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_310979 | k141_310979_24 | 24318 | 25484 | - | GH103 |
| TC | k141_310979 | k141_310979_25 | 25587 | 26705 | - | 2.A.103.1.2 |
| peptidase | k141_310979 | k141_310979_26 | 26702 | 28654 | - | X52.001 |
| pfam | k141_310979 | k141_310979_27 | 28658 | 29143 | - | MreD |
| TC | k141_310979 | k141_310979_28 | 29140 | 30138 | - | 9.B.157.1.3 |
| TC | k141_310979 | k141_310979_29 | 30163 | 31209 | - | 9.B.157.1.3 |
Gene ID: k141_310979_24
Type: CAZyme
Location: 24318 - 25484 (-)
Type: CAZyme
Location: 24318 - 25484 (-)
Gene ID: k141_310979_25
Type: TC
Location: 25587 - 26705 (-)
Type: TC
Location: 25587 - 26705 (-)
Gene ID: k141_310979_26
Type: peptidase
Location: 26702 - 28654 (-)
Type: peptidase
Location: 26702 - 28654 (-)
Gene ID: k141_310979_27
Type: pfam
Location: 28658 - 29143 (-)
Type: pfam
Location: 28658 - 29143 (-)
Gene ID: k141_310979_28
Type: TC
Location: 29140 - 30138 (-)
Type: TC
Location: 29140 - 30138 (-)
Gene ID: k141_310979_29
Type: TC
Location: 30163 - 31209 (-)
Type: TC
Location: 30163 - 31209 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.