Cluster: CGMR045759_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045759
- CGC Family ID: CGCFAM_01451
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2242223 | k141_2242223_17 | 19328 | 21202 | + | 9.B.121.1.1 |
| STP | k141_2242223 | k141_2242223_18 | 21210 | 21638 | - | CBS | CBS |
| CAZyme | k141_2242223 | k141_2242223_19 | 21598 | 22647 | - | GT2 |
| CAZyme | k141_2242223 | k141_2242223_20 | 22673 | 23452 | - | GT51 |
Gene ID: k141_2242223_17
Type: TC
Location: 19328 - 21202 (+)
Type: TC
Location: 19328 - 21202 (+)
Gene ID: k141_2242223_18
Type: STP
Location: 21210 - 21638 (-)
Type: STP
Location: 21210 - 21638 (-)
Gene ID: k141_2242223_19
Type: CAZyme
Location: 21598 - 22647 (-)
Type: CAZyme
Location: 21598 - 22647 (-)
Gene ID: k141_2242223_20
Type: CAZyme
Location: 22673 - 23452 (-)
Type: CAZyme
Location: 22673 - 23452 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.