Cluster: CGMR045759_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045759
- CGC Family ID: CGCFAM_02192
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2093827 | k141_2093827_4 | 3231 | 4157 | + | GH23 |
| TC | k141_2093827 | k141_2093827_5 | 4326 | 4997 | + | 3.D.3.1.1 |
| TC | k141_2093827 | k141_2093827_6 | 5001 | 6266 | + | 3.D.3.1.1 |
| pfam | k141_2093827 | k141_2093827_7 | 6253 | 7059 | + | Cytochrom_C1 |
| TC | k141_2093827 | k141_2093827_8 | 7159 | 7797 | + | 1.A.12.3.1 |
Gene ID: k141_2093827_4
Type: CAZyme
Location: 3231 - 4157 (+)
Type: CAZyme
Location: 3231 - 4157 (+)
Gene ID: k141_2093827_5
Type: TC
Location: 4326 - 4997 (+)
Type: TC
Location: 4326 - 4997 (+)
Gene ID: k141_2093827_6
Type: TC
Location: 5001 - 6266 (+)
Type: TC
Location: 5001 - 6266 (+)
Gene ID: k141_2093827_7
Type: pfam
Location: 6253 - 7059 (+)
Type: pfam
Location: 6253 - 7059 (+)
Gene ID: k141_2093827_8
Type: TC
Location: 7159 - 7797 (+)
Type: TC
Location: 7159 - 7797 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Lysobacter_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.