Cluster: CGMR045347_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045347
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_161805 | k141_161805_4 | 2656 | 4032 | - | GH13_20 |
| TC | k141_161805 | k141_161805_5 | 4215 | 5411 | - | 2.A.1.2.18 |
| TC | k141_161805 | k141_161805_6 | 5532 | 7892 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | k141_161805 | k141_161805_7 | 8014 | 8334 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_161805 | k141_161805_8 | 8800 | 10263 | - | 2.A.3.2.3 |
Gene ID: k141_161805_4
Type: CAZyme
Location: 2656 - 4032 (-)
Type: CAZyme
Location: 2656 - 4032 (-)
Gene ID: k141_161805_5
Type: TC
Location: 4215 - 5411 (-)
Type: TC
Location: 4215 - 5411 (-)
Gene ID: k141_161805_6
Type: TC
Location: 5532 - 7892 (-)
Type: TC
Location: 5532 - 7892 (-)
Gene ID: k141_161805_7
Type:
Location: 8014 - 8334 (-)
Type:
Location: 8014 - 8334 (-)
Gene ID: k141_161805_8
Type: TC
Location: 8800 - 10263 (-)
Type: TC
Location: 8800 - 10263 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_161805_8 | vegan > omnivore | 1.25080 | 0.00820 |