Cluster: CGMR045347_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045347
- CGC Family ID: CGCFAM_00154
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_179547 | k141_179547_41 | 55069 | 56499 | + | GH1 |
| sulfatase | k141_179547 | k141_179547_42 | 56970 | 57881 | + | S1_7 |
| TC | k141_179547 | k141_179547_43 | 58021 | 60789 | - | 3.A.3.4.1 |
| STP | k141_179547 | k141_179547_44 | 61227 | 61907 | + | Pribosyltran |
| TF | k141_179547 | k141_179547_45 | 62305 | 63159 | - | HTH_6 |
| TC | k141_179547 | k141_179547_46 | 63497 | 64033 | + | 4.A.1.2.6 |
Gene ID: k141_179547_41
Type: CAZyme
Location: 55069 - 56499 (+)
Type: CAZyme
Location: 55069 - 56499 (+)
Gene ID: k141_179547_42
Type: sulfatase
Location: 56970 - 57881 (+)
Type: sulfatase
Location: 56970 - 57881 (+)
Gene ID: k141_179547_43
Type: TC
Location: 58021 - 60789 (-)
Type: TC
Location: 58021 - 60789 (-)
Gene ID: k141_179547_44
Type: STP
Location: 61227 - 61907 (+)
Type: STP
Location: 61227 - 61907 (+)
Gene ID: k141_179547_45
Type: TF
Location: 62305 - 63159 (-)
Type: TF
Location: 62305 - 63159 (-)
Gene ID: k141_179547_46
Type: TC
Location: 63497 - 64033 (+)
Type: TC
Location: 63497 - 64033 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_179547_42 | vegetarian > vegan | 1.17660 | 0.01882 |