Cluster: CGMR045332_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045332
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5756 | k141_5756_2 | 222 | 938 | - | 9.B.20.2.2 |
| pfam | k141_5756 | k141_5756_3 | 1104 | 2441 | + | UPF0004 | TRAM | Radical_SAM | TRAM_2 |
| CAZyme | k141_5756 | k141_5756_4 | 2481 | 4499 | + | GT41 |
Gene ID: k141_5756_2
Type: TC
Location: 222 - 938 (-)
Type: TC
Location: 222 - 938 (-)
Gene ID: k141_5756_3
Type: pfam
Location: 1104 - 2441 (+)
Type: pfam
Location: 1104 - 2441 (+)
Gene ID: k141_5756_4
Type: CAZyme
Location: 2481 - 4499 (+)
Type: CAZyme
Location: 2481 - 4499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902482195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_5756_2 | vegetarian > omnivore | 1.13520 | 0.02445 |