Cluster: CGMR045332_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045332
- CGC Family ID: CGCFAM_00908
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_146563 | k141_146563_1 | 73 | 501 | + | 3.A.4.1.1 |
| TC | k141_146563 | k141_146563_2 | 764 | 1804 | + | 2.A.59.1.6 |
| pfam | k141_146563 | k141_146563_3 | 2266 | 3459 | - | MTS | tRNA_U5-meth_tr | Methyltransf_31 |
| CAZyme | k141_146563 | k141_146563_4 | 3456 | 4499 | - | GH3 |
Gene ID: k141_146563_1
Type: TC
Location: 73 - 501 (+)
Type: TC
Location: 73 - 501 (+)
Gene ID: k141_146563_2
Type: TC
Location: 764 - 1804 (+)
Type: TC
Location: 764 - 1804 (+)
Gene ID: k141_146563_3
Type: pfam
Location: 2266 - 3459 (-)
Type: pfam
Location: 2266 - 3459 (-)
Gene ID: k141_146563_4
Type: CAZyme
Location: 3456 - 4499 (-)
Type: CAZyme
Location: 3456 - 4499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902482195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_146563_3 | vegan > omnivore | 1.24671 | 0.02030 |
| k141_146563_3 | vegetarian > omnivore | 1.15021 | 0.02445 |