Cluster: CGMR045332_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045332
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6406 | k141_6406_3 | 1096 | 1401 | + | 9.B.21.2.1 |
| TC | k141_6406 | k141_6406_4 | 1401 | 3266 | + | 2.A.16.2.2 |
| pfam | k141_6406 | k141_6406_5 | 3309 | 4850 | - | PFL-like | YjjI-like |
| TC | k141_6406 | k141_6406_6 | 5008 | 5706 | + | 2.A.115.2.7 |
| CAZyme | k141_6406 | k141_6406_7 | 5656 | 6684 | - | GT9 |
Gene ID: k141_6406_3
Type: TC
Location: 1096 - 1401 (+)
Type: TC
Location: 1096 - 1401 (+)
Gene ID: k141_6406_4
Type: TC
Location: 1401 - 3266 (+)
Type: TC
Location: 1401 - 3266 (+)
Gene ID: k141_6406_5
Type: pfam
Location: 3309 - 4850 (-)
Type: pfam
Location: 3309 - 4850 (-)
Gene ID: k141_6406_6
Type: TC
Location: 5008 - 5706 (+)
Type: TC
Location: 5008 - 5706 (+)
Gene ID: k141_6406_7
Type: CAZyme
Location: 5656 - 6684 (-)
Type: CAZyme
Location: 5656 - 6684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902482195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_6406_6 | vegan > omnivore | 1.22309 | 0.02030 |
| k141_6406_6 | vegetarian > omnivore | 1.33433 | 0.02445 |
| k141_6406_7 | vegan > omnivore | 1.65766 | 0.02030 |
| k141_6406_7 | vegetarian > omnivore | 1.42538 | 0.02445 |