Cluster: CGMR045332_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045332
- CGC Family ID: CGCFAM_00702
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_95989 | k141_95989_1 | 1 | 717 | + | 2.A.88.8.6 |
| TC | k141_95989 | k141_95989_2 | 732 | 2048 | + | 2.A.1.15.11 |
| peptidase | k141_95989 | k141_95989_3 | 2269 | 3096 | + | C44.UPW |
| STP | k141_95989 | k141_95989_4 | 3166 | 4536 | - | Pyr_redox_2 |
| CAZyme | k141_95989 | k141_95989_5 | 4756 | 5940 | + | GT2 |
| TC | k141_95989 | k141_95989_6 | 6090 | 8012 | - | 1.B.40.2.1 |
Gene ID: k141_95989_1
Type: TC
Location: 1 - 717 (+)
Type: TC
Location: 1 - 717 (+)
Gene ID: k141_95989_2
Type: TC
Location: 732 - 2048 (+)
Type: TC
Location: 732 - 2048 (+)
Gene ID: k141_95989_3
Type: peptidase
Location: 2269 - 3096 (+)
Type: peptidase
Location: 2269 - 3096 (+)
Gene ID: k141_95989_4
Type: STP
Location: 3166 - 4536 (-)
Type: STP
Location: 3166 - 4536 (-)
Gene ID: k141_95989_5
Type: CAZyme
Location: 4756 - 5940 (+)
Type: CAZyme
Location: 4756 - 5940 (+)
Gene ID: k141_95989_6
Type: TC
Location: 6090 - 8012 (-)
Type: TC
Location: 6090 - 8012 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902482195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_95989_1 | vegetarian > omnivore | 1.10556 | 0.02445 |
| k141_95989_3 | vegan > omnivore | 1.38407 | 0.02030 |