Cluster: CGMR045332_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045332
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_177543 | k141_177543_5 | 4265 | 6115 | + | 3.A.18.1.1 |
| CAZyme | k141_177543 | k141_177543_6 | 6211 | 7605 | + | GH23 |
| NULL(UNKNOWN) | k141_177543 | k141_177543_7 | 7661 | 7804 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_177543 | k141_177543_8 | 7852 | 8820 | - | TbpB_B_D |
| TC | k141_177543 | k141_177543_9 | 8981 | 11281 | + | 1.B.14.2.1 |
| pfam | k141_177543 | k141_177543_10 | 11347 | 11670 | - | Ribosomal_S30AE |
| TC | k141_177543 | k141_177543_11 | 11912 | 13282 | - | 2.A.25.1.4 |
Gene ID: k141_177543_5
Type: TC
Location: 4265 - 6115 (+)
Type: TC
Location: 4265 - 6115 (+)
Gene ID: k141_177543_6
Type: CAZyme
Location: 6211 - 7605 (+)
Type: CAZyme
Location: 6211 - 7605 (+)
Gene ID: k141_177543_7
Type:
Location: 7661 - 7804 (+)
Type:
Location: 7661 - 7804 (+)
Gene ID: k141_177543_8
Type: pfam
Location: 7852 - 8820 (-)
Type: pfam
Location: 7852 - 8820 (-)
Gene ID: k141_177543_9
Type: TC
Location: 8981 - 11281 (+)
Type: TC
Location: 8981 - 11281 (+)
Gene ID: k141_177543_10
Type: pfam
Location: 11347 - 11670 (-)
Type: pfam
Location: 11347 - 11670 (-)
Gene ID: k141_177543_11
Type: TC
Location: 11912 - 13282 (-)
Type: TC
Location: 11912 - 13282 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902482195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_177543_6 | vegetarian > omnivore | 1.62927 | 0.02445 |
| k141_177543_7 | vegetarian > omnivore | 1.50679 | 0.02445 |