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Cluster: CGMR045332_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_143772 k141_143772_4 2646 4031 - 2.A.47.5.2
NULL(UNKNOWN) k141_143772 k141_143772_5 4239 5771 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_143772 k141_143772_6 5817 7043 - 2.A.1.12.1
TF k141_143772 k141_143772_7 7217 7927 + GntR
pfam k141_143772 k141_143772_8 7917 8990 + GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
CAZyme k141_143772 k141_143772_9 9001 10107 + GH177
pfam k141_143772 k141_143772_10 10198 11205 + FRG
pfam k141_143772 k141_143772_11 11257 11889 - PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
TC k141_143772 k141_143772_12 11956 13602 - 3.A.1.5.27
TC k141_143772 k141_143772_13 13771 15180 - 2.A.1.3.51
Gene ID: k141_143772_4
Type: TC
Location: 2646 - 4031 (-)
Gene ID: k141_143772_5
Type:
Location: 4239 - 5771 (+)
Gene ID: k141_143772_6
Type: TC
Location: 5817 - 7043 (-)
Gene ID: k141_143772_7
Type: TF
Location: 7217 - 7927 (+)
Gene ID: k141_143772_8
Type: pfam
Location: 7917 - 8990 (+)
Gene ID: k141_143772_9
Type: CAZyme
Location: 9001 - 10107 (+)
Gene ID: k141_143772_10
Type: pfam
Location: 10198 - 11205 (+)
Gene ID: k141_143772_11
Type: pfam
Location: 11257 - 11889 (-)
Gene ID: k141_143772_12
Type: TC
Location: 11956 - 13602 (-)
Gene ID: k141_143772_13
Type: TC
Location: 13771 - 15180 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_143772_12 vegan > omnivore 1.23593 0.02030

🧭 Explore Read Mapping of CGC

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