Cluster: CGMR045248_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045248
- CGC Family ID: CGCFAM_01421
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_34856 | k141_34856_33 | 38247 | 38906 | - | 3.A.1.3.18 |
| TC | k141_34856 | k141_34856_34 | 38916 | 39593 | - | 3.A.1.3.16 |
| TC | k141_34856 | k141_34856_35 | 39606 | 40400 | - | 3.A.1.3.16 |
| TC | k141_34856 | k141_34856_36 | 40411 | 41169 | - | 3.A.1.3.9 |
| pfam | k141_34856 | k141_34856_37 | 41290 | 43569 | + | DHH | DHHA1 | ssDNA-exonuc_C | RecJ_OB |
| pfam | k141_34856 | k141_34856_38 | 43743 | 45404 | + | Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP |
| CAZyme | k141_34856 | k141_34856_39 | 45473 | 46252 | + | CE1 |
Gene ID: k141_34856_33
Type: TC
Location: 38247 - 38906 (-)
Type: TC
Location: 38247 - 38906 (-)
Gene ID: k141_34856_34
Type: TC
Location: 38916 - 39593 (-)
Type: TC
Location: 38916 - 39593 (-)
Gene ID: k141_34856_35
Type: TC
Location: 39606 - 40400 (-)
Type: TC
Location: 39606 - 40400 (-)
Gene ID: k141_34856_36
Type: TC
Location: 40411 - 41169 (-)
Type: TC
Location: 40411 - 41169 (-)
Gene ID: k141_34856_37
Type: pfam
Location: 41290 - 43569 (+)
Type: pfam
Location: 41290 - 43569 (+)
Gene ID: k141_34856_38
Type: pfam
Location: 43743 - 45404 (+)
Type: pfam
Location: 43743 - 45404 (+)
Gene ID: k141_34856_39
Type: CAZyme
Location: 45473 - 46252 (+)
Type: CAZyme
Location: 45473 - 46252 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.