Cluster: CGMR045248_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR045248
- CGC Family ID: CGCFAM_00402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_46373 | k141_46373_13 | 15572 | 17182 | + | GH13_31 |
| TC | k141_46373 | k141_46373_14 | 17352 | 19319 | + | 3.A.1.5.25 |
| TC | k141_46373 | k141_46373_15 | 19467 | 21428 | + | 3.A.1.5.19 |
| pfam | k141_46373 | k141_46373_16 | 21620 | 23065 | + | DNA_PPF | LytR_cpsA_psr |
| pfam | k141_46373 | k141_46373_17 | 23067 | 23798 | + | CpsB_CapC |
| TC | k141_46373 | k141_46373_18 | 23807 | 24499 | + | 8.A.3.2.3 |
| TC | k141_46373 | k141_46373_19 | 24509 | 25192 | + | 8.A.3.2.2 |
| TC | k141_46373 | k141_46373_20 | 25215 | 26582 | + | 9.B.18.1.2 |
| CAZyme | k141_46373 | k141_46373_21 | 26612 | 27784 | + | GT4 |
| CAZyme | k141_46373 | k141_46373_22 | 27787 | 28935 | + | GT4 |
| CAZyme | k141_46373 | k141_46373_23 | 29069 | 30043 | + | GT2 |
| CAZyme | k141_46373 | k141_46373_24 | 30061 | 31050 | + | GT2 |
| NULL(UNKNOWN) | k141_46373 | k141_46373_25 | 31129 | 32304 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_46373 | k141_46373_26 | 32356 | 33771 | + | 2.A.66.2.16 |
Gene ID: k141_46373_13
Type: CAZyme
Location: 15572 - 17182 (+)
Type: CAZyme
Location: 15572 - 17182 (+)
Gene ID: k141_46373_14
Type: TC
Location: 17352 - 19319 (+)
Type: TC
Location: 17352 - 19319 (+)
Gene ID: k141_46373_15
Type: TC
Location: 19467 - 21428 (+)
Type: TC
Location: 19467 - 21428 (+)
Gene ID: k141_46373_16
Type: pfam
Location: 21620 - 23065 (+)
Type: pfam
Location: 21620 - 23065 (+)
Gene ID: k141_46373_17
Type: pfam
Location: 23067 - 23798 (+)
Type: pfam
Location: 23067 - 23798 (+)
Gene ID: k141_46373_18
Type: TC
Location: 23807 - 24499 (+)
Type: TC
Location: 23807 - 24499 (+)
Gene ID: k141_46373_19
Type: TC
Location: 24509 - 25192 (+)
Type: TC
Location: 24509 - 25192 (+)
Gene ID: k141_46373_20
Type: TC
Location: 25215 - 26582 (+)
Type: TC
Location: 25215 - 26582 (+)
Gene ID: k141_46373_21
Type: CAZyme
Location: 26612 - 27784 (+)
Type: CAZyme
Location: 26612 - 27784 (+)
Gene ID: k141_46373_22
Type: CAZyme
Location: 27787 - 28935 (+)
Type: CAZyme
Location: 27787 - 28935 (+)
Gene ID: k141_46373_23
Type: CAZyme
Location: 29069 - 30043 (+)
Type: CAZyme
Location: 29069 - 30043 (+)
Gene ID: k141_46373_24
Type: CAZyme
Location: 30061 - 31050 (+)
Type: CAZyme
Location: 30061 - 31050 (+)
Gene ID: k141_46373_25
Type:
Location: 31129 - 32304 (+)
Type:
Location: 31129 - 32304 (+)
Gene ID: k141_46373_26
Type: TC
Location: 32356 - 33771 (+)
Type: TC
Location: 32356 - 33771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.