Cluster: CGMR045248_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045248
- CGC Family ID: CGCFAM_00486
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_359484 | k141_359484_38 | 37152 | 41183 | - | GH20 | GH20 |
| TF | k141_359484 | k141_359484_39 | 41478 | 42347 | - | GntR |
| CAZyme | k141_359484 | k141_359484_40 | 42516 | 44303 | + | GH35 |
| TC | k141_359484 | k141_359484_41 | 44300 | 44776 | + | 4.A.6.1.18 |
| TC | k141_359484 | k141_359484_42 | 44803 | 45708 | + | 4.A.6.1.18 |
| TC | k141_359484 | k141_359484_43 | 45695 | 46516 | + | 4.A.6.1.18 |
| TC | k141_359484 | k141_359484_44 | 46586 | 46924 | + | 4.A.6.1.18 |
Gene ID: k141_359484_38
Type: CAZyme
Location: 37152 - 41183 (-)
Type: CAZyme
Location: 37152 - 41183 (-)
Gene ID: k141_359484_39
Type: TF
Location: 41478 - 42347 (-)
Type: TF
Location: 41478 - 42347 (-)
Gene ID: k141_359484_40
Type: CAZyme
Location: 42516 - 44303 (+)
Type: CAZyme
Location: 42516 - 44303 (+)
Gene ID: k141_359484_41
Type: TC
Location: 44300 - 44776 (+)
Type: TC
Location: 44300 - 44776 (+)
Gene ID: k141_359484_42
Type: TC
Location: 44803 - 45708 (+)
Type: TC
Location: 44803 - 45708 (+)
Gene ID: k141_359484_43
Type: TC
Location: 45695 - 46516 (+)
Type: TC
Location: 45695 - 46516 (+)
Gene ID: k141_359484_44
Type: TC
Location: 46586 - 46924 (+)
Type: TC
Location: 46586 - 46924 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_359484_43 | vegan > omnivore | 1.76970 | 0.03027 |