Cluster: CGMR045241_CGC21
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR045241
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_23327 | k141_23327_28 | 33380 | 33937 | - | 9.B.18.1.2 |
| CAZyme | k141_23327 | k141_23327_29 | 33948 | 35153 | - | GT4 |
| TC | k141_23327 | k141_23327_30 | 35191 | 36429 | - | 2.A.66.2.15 |
| pfam | k141_23327 | k141_23327_31 | 36438 | 36995 | - | Hexapep | Hexapep_2 |
| NULL(UNKNOWN) | k141_23327 | k141_23327_32 | 36992 | 38392 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_23327 | k141_23327_33 | 38385 | 39467 | - | GT4 |
| pfam | k141_23327 | k141_23327_34 | 39467 | 40591 | - | Epimerase_2 |
| pfam | k141_23327 | k141_23327_35 | 40595 | 41707 | - | Epimerase | Polysacc_synt_C |
| TC | k141_23327 | k141_23327_36 | 41717 | 42748 | - | 9.B.18.2.1 |
| TC | k141_23327 | k141_23327_37 | 42748 | 43629 | - | 9.B.18.2.1 |
| TC | k141_23327 | k141_23327_38 | 43660 | 44559 | - | 9.B.18.2.1 |
| pfam | k141_23327 | k141_23327_39 | 44579 | 45343 | - | CpsB_CapC |
| TC | k141_23327 | k141_23327_40 | 45346 | 46032 | - | 8.A.3.2.1 |
| TC | k141_23327 | k141_23327_41 | 46048 | 46716 | - | 8.A.3.2.4 |
Gene ID: k141_23327_28
Type: TC
Location: 33380 - 33937 (-)
Type: TC
Location: 33380 - 33937 (-)
Gene ID: k141_23327_29
Type: CAZyme
Location: 33948 - 35153 (-)
Type: CAZyme
Location: 33948 - 35153 (-)
Gene ID: k141_23327_30
Type: TC
Location: 35191 - 36429 (-)
Type: TC
Location: 35191 - 36429 (-)
Gene ID: k141_23327_31
Type: pfam
Location: 36438 - 36995 (-)
Type: pfam
Location: 36438 - 36995 (-)
Gene ID: k141_23327_32
Type:
Location: 36992 - 38392 (-)
Type:
Location: 36992 - 38392 (-)
Gene ID: k141_23327_33
Type: CAZyme
Location: 38385 - 39467 (-)
Type: CAZyme
Location: 38385 - 39467 (-)
Gene ID: k141_23327_34
Type: pfam
Location: 39467 - 40591 (-)
Type: pfam
Location: 39467 - 40591 (-)
Gene ID: k141_23327_35
Type: pfam
Location: 40595 - 41707 (-)
Type: pfam
Location: 40595 - 41707 (-)
Gene ID: k141_23327_36
Type: TC
Location: 41717 - 42748 (-)
Type: TC
Location: 41717 - 42748 (-)
Gene ID: k141_23327_37
Type: TC
Location: 42748 - 43629 (-)
Type: TC
Location: 42748 - 43629 (-)
Gene ID: k141_23327_38
Type: TC
Location: 43660 - 44559 (-)
Type: TC
Location: 43660 - 44559 (-)
Gene ID: k141_23327_39
Type: pfam
Location: 44579 - 45343 (-)
Type: pfam
Location: 44579 - 45343 (-)
Gene ID: k141_23327_40
Type: TC
Location: 45346 - 46032 (-)
Type: TC
Location: 45346 - 46032 (-)
Gene ID: k141_23327_41
Type: TC
Location: 46048 - 46716 (-)
Type: TC
Location: 46048 - 46716 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus argenteus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.