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Cluster: CGMR045241_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_7020 k141_7020_15 15405 17333 - 3.A.1.121.4
TF k141_7020 k141_7020_16 17587 18222 + 0045030
TC k141_7020 k141_7020_17 18521 19603 + 9.B.102.1.2
TC k141_7020 k141_7020_18 19678 19902 + 9.B.102.1.12
TC k141_7020 k141_7020_19 20116 21366 + 1.A.11.1.4
TF k141_7020 k141_7020_20 21538 22488 + LacI
CAZyme k141_7020 k141_7020_21 22637 24121 + GH32
STP k141_7020 k141_7020_22 24118 25077 + PfkB
TF k141_7020 k141_7020_23 25430 26146 - LytTR
TC k141_7020 k141_7020_24 26165 27457 - 9.B.14.1.13
pfam k141_7020 k141_7020_25 27482 27622 - AgrD
TC k141_7020 k141_7020_26 27624 28241 - 9.B.46.1.1
Gene ID: k141_7020_15
Type: TC
Location: 15405 - 17333 (-)
Gene ID: k141_7020_16
Type: TF
Location: 17587 - 18222 (+)
Gene ID: k141_7020_17
Type: TC
Location: 18521 - 19603 (+)
Gene ID: k141_7020_18
Type: TC
Location: 19678 - 19902 (+)
Gene ID: k141_7020_19
Type: TC
Location: 20116 - 21366 (+)
Gene ID: k141_7020_20
Type: TF
Location: 21538 - 22488 (+)
Gene ID: k141_7020_21
Type: CAZyme
Location: 22637 - 24121 (+)
Gene ID: k141_7020_22
Type: STP
Location: 24118 - 25077 (+)
Gene ID: k141_7020_23
Type: TF
Location: 25430 - 26146 (-)
Gene ID: k141_7020_24
Type: TC
Location: 26165 - 27457 (-)
Gene ID: k141_7020_25
Type: pfam
Location: 27482 - 27622 (-)
Gene ID: k141_7020_26
Type: TC
Location: 27624 - 28241 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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