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Cluster: CGMR045183_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_195512 k141_195512_28 34823 35881 + 3.A.1.2.12
TC k141_195512 k141_195512_29 36580 38115 + 3.A.1.2.12
TC k141_195512 k141_195512_30 38108 39172 + 3.A.1.2.12
TC k141_195512 k141_195512_31 39169 40122 + 3.A.1.2.12
CAZyme k141_195512 k141_195512_32 40254 42452 + CBM41 | GH13_14
CAZyme k141_195512 k141_195512_33 42603 44486 + CBM48 | GH13_9
pfam k141_195512 k141_195512_34 44545 45684 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
pfam k141_195512 k141_195512_35 45674 46807 + NTP_transferase | Hexapep_GlmU
CAZyme k141_195512 k141_195512_36 46804 48243 + GT5
CAZyme k141_195512 k141_195512_37 48339 50735 + GT35
TC k141_195512 k141_195512_38 52265 53416 + 3.A.1.12.4
TC k141_195512 k141_195512_39 53416 54054 + 3.A.1.12.3
TC k141_195512 k141_195512_40 54054 54989 + 3.A.1.12.4
TC k141_195512 k141_195512_41 54990 55655 + 3.A.1.12.4
Gene ID: k141_195512_28
Type: TC
Location: 34823 - 35881 (+)
Gene ID: k141_195512_29
Type: TC
Location: 36580 - 38115 (+)
Gene ID: k141_195512_30
Type: TC
Location: 38108 - 39172 (+)
Gene ID: k141_195512_31
Type: TC
Location: 39169 - 40122 (+)
Gene ID: k141_195512_32
Type: CAZyme
Location: 40254 - 42452 (+)
Gene ID: k141_195512_33
Type: CAZyme
Location: 42603 - 44486 (+)
Gene ID: k141_195512_34
Type: pfam
Location: 44545 - 45684 (+)
Gene ID: k141_195512_35
Type: pfam
Location: 45674 - 46807 (+)
Gene ID: k141_195512_36
Type: CAZyme
Location: 46804 - 48243 (+)
Gene ID: k141_195512_37
Type: CAZyme
Location: 48339 - 50735 (+)
Gene ID: k141_195512_38
Type: TC
Location: 52265 - 53416 (+)
Gene ID: k141_195512_39
Type: TC
Location: 53416 - 54054 (+)
Gene ID: k141_195512_40
Type: TC
Location: 54054 - 54989 (+)
Gene ID: k141_195512_41
Type: TC
Location: 54990 - 55655 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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