dbCAN Logo

Cluster: CGMR045166_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2162 k141_2162_6 4339 4875 - 9.B.156.3.1
TC k141_2162 k141_2162_7 4863 5462 - 9.B.156.3.1
peptidase k141_2162 k141_2162_8 5498 6370 - M50.UPW
TC k141_2162 k141_2162_9 6367 7005 - 1.A.34.1.3
pfam k141_2162 k141_2162_10 7254 10823 + SMC_N | SMC_hinge | AAA_15 | AAA_23
TC k141_2162 k141_2162_11 10878 11786 + 3.A.5.1.1
pfam k141_2162 k141_2162_12 11832 14555 + UPF0182
pfam k141_2162 k141_2162_13 14646 15296 + Pentapeptide | Pentapeptide | Pentapeptide | Pentapeptide_4 | Pentapeptide_4
TC k141_2162 k141_2162_14 15334 16722 + 2.A.50.2.1
pfam k141_2162 k141_2162_15 16735 17808 + ALGX
TC k141_2162 k141_2162_16 17862 19637 - 3.A.1.21.1
TC k141_2162 k141_2162_17 19644 21416 - 3.A.1.21.1
STP k141_2162 k141_2162_18 21567 22184 - TetR_N
CAZyme k141_2162 k141_2162_19 22357 24162 + GH123
TF k141_2162 k141_2162_20 24292 25194 - HTH_1
pfam k141_2162 k141_2162_21 25318 26187 + EamA | EamA
TC k141_2162 k141_2162_22 26355 27977 + 2.A.53.3.9
TC k141_2162 k141_2162_23 28046 29404 - 2.A.66.1.32
TF k141_2162 k141_2162_24 29407 29835 - MarR
TF k141_2162 k141_2162_25 30019 30453 + MarR
TC k141_2162 k141_2162_26 30468 33281 + 9.B.74.1.1
Gene ID: k141_2162_6
Type: TC
Location: 4339 - 4875 (-)
Gene ID: k141_2162_7
Type: TC
Location: 4863 - 5462 (-)
Gene ID: k141_2162_8
Type: peptidase
Location: 5498 - 6370 (-)
Gene ID: k141_2162_9
Type: TC
Location: 6367 - 7005 (-)
Gene ID: k141_2162_10
Type: pfam
Location: 7254 - 10823 (+)
Gene ID: k141_2162_11
Type: TC
Location: 10878 - 11786 (+)
Gene ID: k141_2162_12
Type: pfam
Location: 11832 - 14555 (+)
Gene ID: k141_2162_13
Type: pfam
Location: 14646 - 15296 (+)
Gene ID: k141_2162_14
Type: TC
Location: 15334 - 16722 (+)
Gene ID: k141_2162_15
Type: pfam
Location: 16735 - 17808 (+)
Gene ID: k141_2162_16
Type: TC
Location: 17862 - 19637 (-)
Gene ID: k141_2162_17
Type: TC
Location: 19644 - 21416 (-)
Gene ID: k141_2162_18
Type: STP
Location: 21567 - 22184 (-)
Gene ID: k141_2162_19
Type: CAZyme
Location: 22357 - 24162 (+)
Gene ID: k141_2162_20
Type: TF
Location: 24292 - 25194 (-)
Gene ID: k141_2162_21
Type: pfam
Location: 25318 - 26187 (+)
Gene ID: k141_2162_22
Type: TC
Location: 26355 - 27977 (+)
Gene ID: k141_2162_23
Type: TC
Location: 28046 - 29404 (-)
Gene ID: k141_2162_24
Type: TF
Location: 29407 - 29835 (-)
Gene ID: k141_2162_25
Type: TF
Location: 30019 - 30453 (+)
Gene ID: k141_2162_26
Type: TC
Location: 30468 - 33281 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1840
→
Family
HGM11507
→
Genus
HGM11507
→
Species
HGM11507 sp934403665

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List