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Cluster: CGMR045165_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_63904 k141_63904_6 4086 4904 + 2.A.64.2.2
pfam k141_63904 k141_63904_7 4983 7658 + DEAD | Helicase_C | ResIII | DSHCT | DEXQc_Suv3
TC k141_63904 k141_63904_8 7709 9976 - 3.A.5.2.2
pfam k141_63904 k141_63904_9 10039 11820 - RNase_T | 5_3_exonuc | 5_3_exonuc_N
NULL(UNKNOWN) k141_63904 k141_63904_10 11877 12872 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_63904 k141_63904_11 13110 13844 + GT2
TC k141_63904 k141_63904_12 13903 14625 + 3.A.1.105.4
TC k141_63904 k141_63904_13 14622 15356 + 3.A.1.105.6
Gene ID: k141_63904_6
Type: TC
Location: 4086 - 4904 (+)
Gene ID: k141_63904_7
Type: pfam
Location: 4983 - 7658 (+)
Gene ID: k141_63904_8
Type: TC
Location: 7709 - 9976 (-)
Gene ID: k141_63904_9
Type: pfam
Location: 10039 - 11820 (-)
Gene ID: k141_63904_10
Type:
Location: 11877 - 12872 (+)
Gene ID: k141_63904_11
Type: CAZyme
Location: 13110 - 13844 (+)
Gene ID: k141_63904_12
Type: TC
Location: 13903 - 14625 (+)
Gene ID: k141_63904_13
Type: TC
Location: 14622 - 15356 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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