Cluster: CGMR045102_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045102
- CGC Family ID: CGCFAM_08604
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40833 | k141_40833_17 | 17069 | 18259 | + | GT1 |
| TF | k141_40833 | k141_40833_18 | 18408 | 18869 | + | MarR |
| TC | k141_40833 | k141_40833_19 | 18995 | 20758 | + | 3.A.1.135.6 |
| TC | k141_40833 | k141_40833_20 | 20755 | 22587 | + | 3.A.1.135.6 |
| pfam | k141_40833 | k141_40833_21 | 22779 | 24389 | + | CusB_dom_1 | HlyD_3 | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| TC | k141_40833 | k141_40833_22 | 24386 | 25054 | + | 3.A.1.122.2 |
Gene ID: k141_40833_17
Type: CAZyme
Location: 17069 - 18259 (+)
Type: CAZyme
Location: 17069 - 18259 (+)
Gene ID: k141_40833_18
Type: TF
Location: 18408 - 18869 (+)
Type: TF
Location: 18408 - 18869 (+)
Gene ID: k141_40833_19
Type: TC
Location: 18995 - 20758 (+)
Type: TC
Location: 18995 - 20758 (+)
Gene ID: k141_40833_20
Type: TC
Location: 20755 - 22587 (+)
Type: TC
Location: 20755 - 22587 (+)
Gene ID: k141_40833_21
Type: pfam
Location: 22779 - 24389 (+)
Type: pfam
Location: 22779 - 24389 (+)
Gene ID: k141_40833_22
Type: TC
Location: 24386 - 25054 (+)
Type: TC
Location: 24386 - 25054 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.