Cluster: CGMR045102_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR045102
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_221995 | k141_221995_11 | 11367 | 12737 | - | 2.A.66.1.28 |
| TC | k141_221995 | k141_221995_12 | 12903 | 14618 | + | 3.A.1.135.7 |
| TC | k141_221995 | k141_221995_13 | 14611 | 16347 | + | 3.A.1.135.5 |
| TC | k141_221995 | k141_221995_14 | 16623 | 18260 | + | 3.A.1.121.2 |
| pfam | k141_221995 | k141_221995_15 | 18353 | 19186 | - | AP_endonuc_2 |
| CAZyme | k141_221995 | k141_221995_16 | 19398 | 20318 | + | GH18 |
Gene ID: k141_221995_11
Type: TC
Location: 11367 - 12737 (-)
Type: TC
Location: 11367 - 12737 (-)
Gene ID: k141_221995_12
Type: TC
Location: 12903 - 14618 (+)
Type: TC
Location: 12903 - 14618 (+)
Gene ID: k141_221995_13
Type: TC
Location: 14611 - 16347 (+)
Type: TC
Location: 14611 - 16347 (+)
Gene ID: k141_221995_14
Type: TC
Location: 16623 - 18260 (+)
Type: TC
Location: 16623 - 18260 (+)
Gene ID: k141_221995_15
Type: pfam
Location: 18353 - 19186 (-)
Type: pfam
Location: 18353 - 19186 (-)
Gene ID: k141_221995_16
Type: CAZyme
Location: 19398 - 20318 (+)
Type: CAZyme
Location: 19398 - 20318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Sedimentibacteraceae
Genus
Sedimentibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.