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Cluster: CGMR045010_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42364 k141_42364_24 25109 28204 + 2.A.6.2.4
pfam k141_42364 k141_42364_25 28277 28855 + DUF4112
TC k141_42364 k141_42364_26 28895 29800 - 9.B.1.1.6
CAZyme k141_42364 k141_42364_27 30058 30924 - GH23
pfam k141_42364 k141_42364_28 31429 32334 + ATP_bind_3
pfam k141_42364 k141_42364_29 32543 32926 + SCP2
CAZyme k141_42364 k141_42364_30 33018 34130 - GH23
pfam k141_42364 k141_42364_31 34503 34997 + GreA_GreB | GreA_GreB_N
pfam k141_42364 k141_42364_32 35256 35684 - SnoaL_2 | DUF4440
TC k141_42364 k141_42364_33 36394 40392 + 4.C.1.1.6
TC k141_42364 k141_42364_34 40439 43546 + 2.A.6.2.4
Gene ID: k141_42364_24
Type: TC
Location: 25109 - 28204 (+)
Gene ID: k141_42364_25
Type: pfam
Location: 28277 - 28855 (+)
Gene ID: k141_42364_26
Type: TC
Location: 28895 - 29800 (-)
Gene ID: k141_42364_27
Type: CAZyme
Location: 30058 - 30924 (-)
Gene ID: k141_42364_28
Type: pfam
Location: 31429 - 32334 (+)
Gene ID: k141_42364_29
Type: pfam
Location: 32543 - 32926 (+)
Gene ID: k141_42364_30
Type: CAZyme
Location: 33018 - 34130 (-)
Gene ID: k141_42364_31
Type: pfam
Location: 34503 - 34997 (+)
Gene ID: k141_42364_32
Type: pfam
Location: 35256 - 35684 (-)
Gene ID: k141_42364_33
Type: TC
Location: 36394 - 40392 (+)
Gene ID: k141_42364_34
Type: TC
Location: 40439 - 43546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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