Cluster: CGMR044989_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR044989
- CGC Family ID: CGCFAM_03563
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2826 | k141_2826_4 | 1673 | 4345 | + | GH73 |
| NULL(UNKNOWN) | k141_2826 | k141_2826_5 | 4451 | 6718 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_2826 | k141_2826_6 | 6893 | 7603 | + | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| TC | k141_2826 | k141_2826_7 | 7679 | 9595 | - | 3.A.1.135.5 |
| TC | k141_2826 | k141_2826_8 | 9588 | 11489 | - | 3.A.1.135.5 |
Gene ID: k141_2826_4
Type: CAZyme
Location: 1673 - 4345 (+)
Type: CAZyme
Location: 1673 - 4345 (+)
Gene ID: k141_2826_5
Type:
Location: 4451 - 6718 (-)
Type:
Location: 4451 - 6718 (-)
Gene ID: k141_2826_6
Type: pfam
Location: 6893 - 7603 (+)
Type: pfam
Location: 6893 - 7603 (+)
Gene ID: k141_2826_7
Type: TC
Location: 7679 - 9595 (-)
Type: TC
Location: 7679 - 9595 (-)
Gene ID: k141_2826_8
Type: TC
Location: 9588 - 11489 (-)
Type: TC
Location: 9588 - 11489 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Atopobiaceae
Genus
Lancefieldella
Species
Lancefieldella parvula
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.