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Cluster: CGMR043824_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_104333 k141_104333_22 21111 22400 + GH13_38
pfam k141_104333 k141_104333_23 22622 23047 - ATP-synt_C | ATP-synt_C
TC k141_104333 k141_104333_24 23083 24807 - 3.A.2.3.3
pfam k141_104333 k141_104333_25 24804 25406 - ATP-synt_D
TC k141_104333 k141_104333_26 25409 26731 - 3.A.2.3.3
TC k141_104333 k141_104333_27 26735 28477 - 3.A.2.3.3
pfam k141_104333 k141_104333_28 28474 29082 - DUF2764
NULL(UNKNOWN) k141_104333 k141_104333_29 29084 29689 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_104333 k141_104333_30 29895 31040 - 3.B.1.1.3
TC k141_104333 k141_104333_31 31040 31480 - 3.B.1.1.2
pfam k141_104333 k141_104333_32 31477 31887 - OAD_gamma
TC k141_104333 k141_104333_33 31868 33400 - 3.B.1.1.5
Gene ID: k141_104333_22
Type: CAZyme
Location: 21111 - 22400 (+)
Gene ID: k141_104333_23
Type: pfam
Location: 22622 - 23047 (-)
Gene ID: k141_104333_24
Type: TC
Location: 23083 - 24807 (-)
Gene ID: k141_104333_25
Type: pfam
Location: 24804 - 25406 (-)
Gene ID: k141_104333_26
Type: TC
Location: 25409 - 26731 (-)
Gene ID: k141_104333_27
Type: TC
Location: 26735 - 28477 (-)
Gene ID: k141_104333_28
Type: pfam
Location: 28474 - 29082 (-)
Gene ID: k141_104333_29
Type:
Location: 29084 - 29689 (-)
Gene ID: k141_104333_30
Type: TC
Location: 29895 - 31040 (-)
Gene ID: k141_104333_31
Type: TC
Location: 31040 - 31480 (-)
Gene ID: k141_104333_32
Type: pfam
Location: 31477 - 31887 (-)
Gene ID: k141_104333_33
Type: TC
Location: 31868 - 33400 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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