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Cluster: CGMR043673_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_16248 k141_16248_5 3871 4923 - GT113
pfam k141_16248 k141_16248_6 4934 5926 - Stealth_CR2 | Stealth_CR1
STP k141_16248 k141_16248_7 5923 7023 - Pyr_redox
TC k141_16248 k141_16248_8 7035 8447 - 2.A.66.2.16
NULL(UNKNOWN) k141_16248 k141_16248_9 8444 9598 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_16248 k141_16248_10 9632 10702 - GT2
pfam k141_16248 k141_16248_11 10702 11667 - DUF6625
pfam k141_16248 k141_16248_12 11664 12305 - DUF1919
CAZyme k141_16248 k141_16248_13 12307 13455 - GT4
CAZyme k141_16248 k141_16248_14 13458 14630 - GT4
TC k141_16248 k141_16248_15 14661 16031 - 9.B.18.1.2
TC k141_16248 k141_16248_16 16047 16739 - 8.A.3.2.2
TC k141_16248 k141_16248_17 16750 17442 - 8.A.3.2.3
Gene ID: k141_16248_5
Type: CAZyme
Location: 3871 - 4923 (-)
Gene ID: k141_16248_6
Type: pfam
Location: 4934 - 5926 (-)
Gene ID: k141_16248_7
Type: STP
Location: 5923 - 7023 (-)
Gene ID: k141_16248_8
Type: TC
Location: 7035 - 8447 (-)
Gene ID: k141_16248_9
Type:
Location: 8444 - 9598 (-)
Gene ID: k141_16248_10
Type: CAZyme
Location: 9632 - 10702 (-)
Gene ID: k141_16248_11
Type: pfam
Location: 10702 - 11667 (-)
Gene ID: k141_16248_12
Type: pfam
Location: 11664 - 12305 (-)
Gene ID: k141_16248_13
Type: CAZyme
Location: 12307 - 13455 (-)
Gene ID: k141_16248_14
Type: CAZyme
Location: 13458 - 14630 (-)
Gene ID: k141_16248_15
Type: TC
Location: 14661 - 16031 (-)
Gene ID: k141_16248_16
Type: TC
Location: 16047 - 16739 (-)
Gene ID: k141_16248_17
Type: TC
Location: 16750 - 17442 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_16248_13 vegetarian > vegan 1.65767 0.02538

🧭 Explore Read Mapping of CGC

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