Cluster: CGMR043371_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR043371
- CGC Family ID: CGCFAM_01073
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2117 | k141_2117_2 | 500 | 1816 | + | 3.A.1.1.22 |
| TC | k141_2117 | k141_2117_3 | 1943 | 2860 | + | 3.A.1.1.22 |
| TC | k141_2117 | k141_2117_4 | 2862 | 3755 | + | 3.A.1.1.6 |
| TF | k141_2117 | k141_2117_5 | 3840 | 4859 | + | LacI |
| CAZyme | k141_2117 | k141_2117_6 | 4983 | 6467 | + | GH77 |
Gene ID: k141_2117_2
Type: TC
Location: 500 - 1816 (+)
Type: TC
Location: 500 - 1816 (+)
Gene ID: k141_2117_3
Type: TC
Location: 1943 - 2860 (+)
Type: TC
Location: 1943 - 2860 (+)
Gene ID: k141_2117_4
Type: TC
Location: 2862 - 3755 (+)
Type: TC
Location: 2862 - 3755 (+)
Gene ID: k141_2117_5
Type: TF
Location: 3840 - 4859 (+)
Type: TF
Location: 3840 - 4859 (+)
Gene ID: k141_2117_6
Type: CAZyme
Location: 4983 - 6467 (+)
Type: CAZyme
Location: 4983 - 6467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.