Cluster: CGMR043371_CGC36
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: CGMR043371
- CGC Family ID: CGCFAM_00725
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_67195 | k141_67195_1 | 181 | 1665 | + | 2.A.22.4.1 |
| NULL(UNKNOWN) | k141_67195 | k141_67195_2 | 1691 | 1804 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_67195 | k141_67195_3 | 2248 | 3165 | + | LacI |
| TC | k141_67195 | k141_67195_4 | 3516 | 4853 | + | 3.A.1.1.6 |
| TC | k141_67195 | k141_67195_5 | 4866 | 5687 | + | 3.A.1.1.6 |
| TC | k141_67195 | k141_67195_6 | 5703 | 6983 | + | 3.A.1.1.26 |
| CAZyme | k141_67195 | k141_67195_7 | 7000 | 8796 | + | CBM34 | GH13_20 |
Gene ID: k141_67195_1
Type: TC
Location: 181 - 1665 (+)
Type: TC
Location: 181 - 1665 (+)
Gene ID: k141_67195_2
Type:
Location: 1691 - 1804 (+)
Type:
Location: 1691 - 1804 (+)
Gene ID: k141_67195_3
Type: TF
Location: 2248 - 3165 (+)
Type: TF
Location: 2248 - 3165 (+)
Gene ID: k141_67195_4
Type: TC
Location: 3516 - 4853 (+)
Type: TC
Location: 3516 - 4853 (+)
Gene ID: k141_67195_5
Type: TC
Location: 4866 - 5687 (+)
Type: TC
Location: 4866 - 5687 (+)
Gene ID: k141_67195_6
Type: TC
Location: 5703 - 6983 (+)
Type: TC
Location: 5703 - 6983 (+)
Gene ID: k141_67195_7
Type: CAZyme
Location: 7000 - 8796 (+)
Type: CAZyme
Location: 7000 - 8796 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.