Cluster: CGMR043371_CGC27
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR043371
- CGC Family ID: CGCFAM_07453
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_39351 | k141_39351_3 | 2344 | 3981 | + | CBM91 | GH43_12 |
| TC | k141_39351 | k141_39351_4 | 4051 | 5721 | - | 3.A.1.1.29 |
| TC | k141_39351 | k141_39351_5 | 5966 | 6856 | - | 3.A.1.1.29 |
| TC | k141_39351 | k141_39351_6 | 6884 | 7858 | - | 3.A.1.1.29 |
| pfam | k141_39351 | k141_39351_7 | 8103 | 8852 | - | DUF624 |
| TF | k141_39351 | k141_39351_8 | 8866 | 10398 | - | HTH_AraC |
| TC | k141_39351 | k141_39351_9 | 10391 | 12193 | - | 8.A.59.2.1 |
| CAZyme | k141_39351 | k141_39351_10 | 12373 | 14460 | + | GH42 |
Gene ID: k141_39351_3
Type: CAZyme
Location: 2344 - 3981 (+)
Type: CAZyme
Location: 2344 - 3981 (+)
Gene ID: k141_39351_4
Type: TC
Location: 4051 - 5721 (-)
Type: TC
Location: 4051 - 5721 (-)
Gene ID: k141_39351_5
Type: TC
Location: 5966 - 6856 (-)
Type: TC
Location: 5966 - 6856 (-)
Gene ID: k141_39351_6
Type: TC
Location: 6884 - 7858 (-)
Type: TC
Location: 6884 - 7858 (-)
Gene ID: k141_39351_7
Type: pfam
Location: 8103 - 8852 (-)
Type: pfam
Location: 8103 - 8852 (-)
Gene ID: k141_39351_8
Type: TF
Location: 8866 - 10398 (-)
Type: TF
Location: 8866 - 10398 (-)
Gene ID: k141_39351_9
Type: TC
Location: 10391 - 12193 (-)
Type: TC
Location: 10391 - 12193 (-)
Gene ID: k141_39351_10
Type: CAZyme
Location: 12373 - 14460 (+)
Type: CAZyme
Location: 12373 - 14460 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.