Cluster: CGMR043123_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR043123
- CGC Family ID: CGCFAM_00291
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_185398 | k141_185398_122 | 125710 | 126621 | + | CE11 |
| pfam | k141_185398 | k141_185398_123 | 126702 | 127157 | - | DciA |
| STP | k141_185398 | k141_185398_124 | 127229 | 128164 | + | Peptidase_M23 |
| TC | k141_185398 | k141_185398_125 | 128322 | 131066 | + | 3.A.5.1.1 |
| peptidase | k141_185398 | k141_185398_126 | 131146 | 132363 | + | T05.UPW |
| TC | k141_185398 | k141_185398_127 | 132396 | 132917 | - | 3.A.11.1.3 |
Gene ID: k141_185398_122
Type: CAZyme
Location: 125710 - 126621 (+)
Type: CAZyme
Location: 125710 - 126621 (+)
Gene ID: k141_185398_123
Type: pfam
Location: 126702 - 127157 (-)
Type: pfam
Location: 126702 - 127157 (-)
Gene ID: k141_185398_124
Type: STP
Location: 127229 - 128164 (+)
Type: STP
Location: 127229 - 128164 (+)
Gene ID: k141_185398_125
Type: TC
Location: 128322 - 131066 (+)
Type: TC
Location: 128322 - 131066 (+)
Gene ID: k141_185398_126
Type: peptidase
Location: 131146 - 132363 (+)
Type: peptidase
Location: 131146 - 132363 (+)
Gene ID: k141_185398_127
Type: TC
Location: 132396 - 132917 (-)
Type: TC
Location: 132396 - 132917 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Halopseudomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.