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Cluster: CGMR042976_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_334721 k141_334721_92 116192 117475 - 2.A.1.10.2
TF k141_334721 k141_334721_93 117584 118777 + HTH_AraC
TC k141_334721 k141_334721_94 118853 120121 + 2.A.1.7.9
CAZyme k141_334721 k141_334721_95 120115 121275 + CE9
pfam k141_334721 k141_334721_96 121279 122043 + Glucosamine_iso
CAZyme k141_334721 k141_334721_97 122048 123577 + GH20
NULL(UNKNOWN) k141_334721 k141_334721_98 123590 124693 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_334721 k141_334721_99 124723 127791 + 1.B.14.6.1
pfam k141_334721 k141_334721_100 127804 129435 + SusD_RagB | SusD-like_3
pfam k141_334721 k141_334721_101 129447 131093 + BACON
CAZyme k141_334721 k141_334721_102 131096 132718 + GH20
Gene ID: k141_334721_92
Type: TC
Location: 116192 - 117475 (-)
Gene ID: k141_334721_93
Type: TF
Location: 117584 - 118777 (+)
Gene ID: k141_334721_94
Type: TC
Location: 118853 - 120121 (+)
Gene ID: k141_334721_95
Type: CAZyme
Location: 120115 - 121275 (+)
Gene ID: k141_334721_96
Type: pfam
Location: 121279 - 122043 (+)
Gene ID: k141_334721_97
Type: CAZyme
Location: 122048 - 123577 (+)
Gene ID: k141_334721_98
Type:
Location: 123590 - 124693 (+)
Gene ID: k141_334721_99
Type: TC
Location: 124723 - 127791 (+)
Gene ID: k141_334721_100
Type: pfam
Location: 127804 - 129435 (+)
Gene ID: k141_334721_101
Type: pfam
Location: 129447 - 131093 (+)
Gene ID: k141_334721_102
Type: CAZyme
Location: 131096 - 132718 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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