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Cluster: CGMR042976_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_334721 k141_334721_19 15562 17733 - GH97
CAZyme k141_334721 k141_334721_20 17745 19682 - GH13_46
CAZyme k141_334721 k141_334721_21 19898 21130 - GH13
CAZyme k141_334721 k141_334721_22 21143 23470 - GH13
pfam k141_334721 k141_334721_23 23542 24999 - SusF_SusE
pfam k141_334721 k141_334721_24 25040 26800 - SusD_RagB | SusD-like_3
TC k141_334721 k141_334721_25 26809 29775 - 1.B.14.6.1
TC k141_334721 k141_334721_26 29822 31132 - 2.A.2.6.2
TC k141_334721 k141_334721_27 31339 32730 + 8.A.59.2.1
TF k141_334721 k141_334721_28 32727 33476 + LytTR
pfam k141_334721 k141_334721_29 33482 34429 - ORF6N
CAZyme k141_334721 k141_334721_30 34590 36671 - GH77
Gene ID: k141_334721_19
Type: CAZyme
Location: 15562 - 17733 (-)
Gene ID: k141_334721_20
Type: CAZyme
Location: 17745 - 19682 (-)
Gene ID: k141_334721_21
Type: CAZyme
Location: 19898 - 21130 (-)
Gene ID: k141_334721_22
Type: CAZyme
Location: 21143 - 23470 (-)
Gene ID: k141_334721_23
Type: pfam
Location: 23542 - 24999 (-)
Gene ID: k141_334721_24
Type: pfam
Location: 25040 - 26800 (-)
Gene ID: k141_334721_25
Type: TC
Location: 26809 - 29775 (-)
Gene ID: k141_334721_26
Type: TC
Location: 29822 - 31132 (-)
Gene ID: k141_334721_27
Type: TC
Location: 31339 - 32730 (+)
Gene ID: k141_334721_28
Type: TF
Location: 32727 - 33476 (+)
Gene ID: k141_334721_29
Type: pfam
Location: 33482 - 34429 (-)
Gene ID: k141_334721_30
Type: CAZyme
Location: 34590 - 36671 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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