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Cluster: CGMR042976_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_334155 k141_334155_127 179766 182513 + GH3
CAZyme k141_334155 k141_334155_128 182654 184102 + GH28
CAZyme k141_334155 k141_334155_129 184129 185619 + GH28
TC k141_334155 k141_334155_130 185635 188817 + 1.B.14.6.1
pfam k141_334155 k141_334155_131 188830 190728 + SusD_RagB | SusD-like_2 | SusD-like_3
NULL(UNKNOWN) k141_334155 k141_334155_132 190756 192930 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_334155 k141_334155_133 192998 195547 + GH89
NULL(UNKNOWN) k141_334155 k141_334155_134 195560 196609 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_334155 k141_334155_135 196648 198441 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_334155 k141_334155_136 198623 201271 + CBM57 | GH2
Gene ID: k141_334155_127
Type: CAZyme
Location: 179766 - 182513 (+)
Gene ID: k141_334155_128
Type: CAZyme
Location: 182654 - 184102 (+)
Gene ID: k141_334155_129
Type: CAZyme
Location: 184129 - 185619 (+)
Gene ID: k141_334155_130
Type: TC
Location: 185635 - 188817 (+)
Gene ID: k141_334155_131
Type: pfam
Location: 188830 - 190728 (+)
Gene ID: k141_334155_132
Type:
Location: 190756 - 192930 (+)
Gene ID: k141_334155_133
Type: CAZyme
Location: 192998 - 195547 (+)
Gene ID: k141_334155_134
Type:
Location: 195560 - 196609 (+)
Gene ID: k141_334155_135
Type:
Location: 196648 - 198441 (+)
Gene ID: k141_334155_136
Type: CAZyme
Location: 198623 - 201271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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